CDS

Accession Number TCMCG018C14297
gbkey CDS
Protein Id XP_011650506.1
Location join(3831169..3832317,3832486..3832680,3833342..3833422,3834164..3834223,3834361..3834455,3834609..3834765,3834854..3834979,3835083..3835163,3835266..3835356,3835449..3835582,3836250..3836318,3836398..3836487,3836595..3836698,3836783..3836951,3837088..3837156)
Gene LOC101222429
GeneID 101222429
Organism Cucumis sativus

Protein

Length 889aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA182750
db_source XM_011652204.2
Definition DNA topoisomerase 1 alpha [Cucumis sativus]

EGGNOG-MAPPER Annotation

COG_category L
Description DNA topoisomerase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03032        [VIEW IN KEGG]
KEGG_ko ko:K03163        [VIEW IN KEGG]
EC 5.99.1.2        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000228        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003916        [VIEW IN EMBL-EBI]
GO:0003917        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005657        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006260        [VIEW IN EMBL-EBI]
GO:0006265        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006338        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007059        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016853        [VIEW IN EMBL-EBI]
GO:0031298        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043596        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044454        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071103        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0140097        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCTGTTGAGACTTTTGGAAAAGCTCCAATGTTCGATGACGACGATGAGGACAACATGCCCATAGTTTTTAAAAGGACTAGTGCATCTAGGCAAAATCAGTTAGATTCGGAAATTAAGCATTCACAAGCTCAGAGGTTGAGTAAGTTACCAGGGAGGCAGGGTTCTGATTTATGTTCAACCAATGGGCAAAGCTCTAATAATCAAAAGAGGATGACTTCATTGCCAAAGACATCACCCATGAGATCCGAAATAGGAAGTCAGAAAGCATCCAGGTCTTCACCTATCCCGGAACCACTTACTAAATCACTAGGCACTAGTTTGAAAGCTTCACATTCTATGGATAGCCGACCAAAAAGTTTGGTAAACGCTGTGGTGAAAGAGGAGAATGTTTCTATAAATCCTAGTCAAGAGAATAGCGACTCTGAAGACGATAAACCATTGAGTATTAGATTAAAAGGGAACCCCAACCAGCCCAATAAAGGGCTTGTATCAACAGTACCAAAGAATAAAGTAAAAAAATCATTAGCAGATTCTGATGATGAGGTTCCTTTGTCATCAAAATTTCAAATGAAGCATGCTTCAGGGGTATTGGGTAGTAAACAACATGGTTTTGATGAGAAGAAACCATTGGTTCCAAAAGTTCATCAGAATGGTTCAACTTCAAGGGATAAGCTACAAAAGCCTGCTGTTCTTTCTAGCAAGAGACCTCTTCCTAATGAAGATTCCCATTCCCCTTCTCAATTTCCAACAAAAAAGCCAAAGCTTACAGATTCATCTTCGCCTTTGAATAGCAAGCTAGTATCATTGAAAGCAAAACAAGAAGTAGATGACGACGACGATGATATTCCTATTTCACAGAGAATGAAGAAGGTGTCTGCAACAGTGAATAAGTCATCAAGTTCTAAGCCAACAATATCAAAAGTTGTTTCTTCTTCAATCAAGAAAACATTCAAAAAATCCAAGAAGCCAGTCAAGAAATCTAAATATGTTAAGTCCACAAAGTTGCTGCCCAGTGCCGGCGATGGACAGAAAAAATGGACCACCTTGGTTCACAATGGTGTCATTTTCCCACCTCCATACCAGACACACGGGGTGAAGATGCTTTATAAAGGGAAGCCTGTTGATTTGACTCCGCCACAAGAGGAGGTTGCAACCATGTTTGCTGTGATGAAGGATACAGATTATATGCTAAAACCAAAATTCAAAGAAAATTTCTGGAATGACTGGCGCAAATTACTTGGGAAAAACCATGTCATTCAAAATTTGGATGATTGTGATTTCACCCCTATATATGACTGGTATCAAATGGAAAAGGAGAAGAAGAAACAGATGACTACAGAAGAGAAGAAGGCTGTGAAGGAGGAGAAACTGAAACAAGAGGAGAAGTACATGTGGGCTATTCTTGATGGGGTTAAGGAGAAGGTTGGAAACTTTAGAGTTGAGCCGCCTGGATTGTTCAGAGGCCGTGGAGAACATCCAAAGATGGGGAAATTGAAAAGGCGCATTTGCCCCAGTGACATCACAATTAATATTGGAAAAGGTGCTCCGATCCCTGAGTGTCCTATACCTGGTGAAAGGTGGAAGGAAGTGAGACATGACAATACGGTCACATGGTTGGCTTTCTGGAATGATCCAATAAATCAAAAAGAATTCAAGTATGTGTTTCTGGCTGCTAGTAGTTCGCTGAAAGGCCAGAGTGACAAAGAGAAATATGAGAAAGCAAGGATGCTCAAGGACTACATAAAAAACATAAGGAATGCGTATACAAAGGATTTTACGAGCAAAGATCCTACACGGAGACAAATTGCAGTTGCTACTTATCTCATAGATAAATTGGCTCTCAGGGCTGGGAATGAGAAAGATGACGATGAAGCTGATACAGTTGGCTGCTGTACACTGAAAGTAGAGAATGTCAAAGCAGTGCCCCCAAATCTTTTGGAGTTCAACTTTCTCGGTAAAGATTCAATCAGGTATGAAAATACTGTTGAGGTCGAGCTCCCTGTTTTCAAAGCAATCACACAATTTCAAAGCGGAAAAAGTGGGACCGATGATCTTTTTGACAAGCTGGATACGAGTAAATTGAATGCACATCTGAAGGATCTCATGCCTGGCCTCACTGCAAAAGTGTTTCGTACATATAATGCTTCTATCACACTTGATGATATGTTGAATAGAGGAACCAAAAATGGAGAGGTTTCAGAAAAGATCGTCACATACCAGCACGCAAACAAGGAGGTTGCAATTATTTGTAATCACCAGCGGACTGTTTCAAAATCACACGGGGCACAAATGACAAGATTGAATGAGAAAATCTCTGAGCTCAGGGACATTCTGAAAGAGCTGAAAATTGATTTAGATAGAGCAAAGAAAGGAAAGCCCCCTTTAAAAGGTTCTGATGGAAAGCAAAAGAGGAACTTGACCCCGGAAGCGTTAGAGAAGAAAATATCCCAAACGAATGCAAAGATCGAGAAGATAGAGCGGGATATGAAGACTAAAGAGGATTTGAAAACCGTGGCGTTAGGCACATCAAAGATTAACTACCTTGATCCTCGGATCACAGTCGCATGGTGTAAACGTCATGAAGTCCCAATTGAAAAGATATTCAACAAATCTCTTCTAGCAAAGTTTGCTTGGGCAATGGACGTCGATCCCGACTTCAGATTCTGA
Protein:  
MAVETFGKAPMFDDDDEDNMPIVFKRTSASRQNQLDSEIKHSQAQRLSKLPGRQGSDLCSTNGQSSNNQKRMTSLPKTSPMRSEIGSQKASRSSPIPEPLTKSLGTSLKASHSMDSRPKSLVNAVVKEENVSINPSQENSDSEDDKPLSIRLKGNPNQPNKGLVSTVPKNKVKKSLADSDDEVPLSSKFQMKHASGVLGSKQHGFDEKKPLVPKVHQNGSTSRDKLQKPAVLSSKRPLPNEDSHSPSQFPTKKPKLTDSSSPLNSKLVSLKAKQEVDDDDDDIPISQRMKKVSATVNKSSSSKPTISKVVSSSIKKTFKKSKKPVKKSKYVKSTKLLPSAGDGQKKWTTLVHNGVIFPPPYQTHGVKMLYKGKPVDLTPPQEEVATMFAVMKDTDYMLKPKFKENFWNDWRKLLGKNHVIQNLDDCDFTPIYDWYQMEKEKKKQMTTEEKKAVKEEKLKQEEKYMWAILDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRICPSDITINIGKGAPIPECPIPGERWKEVRHDNTVTWLAFWNDPINQKEFKYVFLAASSSLKGQSDKEKYEKARMLKDYIKNIRNAYTKDFTSKDPTRRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIRYENTVEVELPVFKAITQFQSGKSGTDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITLDDMLNRGTKNGEVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDILKELKIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF